Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946500.1_cds_XP_016488592.1_79210
CDS Infomation

[gene=LOC107808579] [db_xref=GeneID:107808579] [protein=telomere repeat-binding protein 4-like] [protein_id=XP_016488592.1] [location=complement(join(3711..3911,4376..4439,4533..4856,4997..5241,5973..6052,6185..6232,6314..6511,6612..7458,7549..7629))] [gbkey=CDS]
Sequence

ATGGTGTCAAAGAAGAGGCTGAATTGTGGTTTTAGTGGCTATCAAATTCCTGTTATACCT
AAAGCTCCTAGATCAGCTAGAAAGAGACGCCCCTGTAACAAATTGGACGATGATCAAATT
TGTGCATTTGAATTATTGGCGGCTGTAGCTGGCAAACTGTTACTTGAGAGTGAAAGTTCT
GCTTCAAGTAATGCAGGTGCACCAGCGGGAAAATATGAGCTCGCTGATTGCAGGGATAGT
ATTAAACATGAACAAGTGGAAGATGATAAAGCTGTGAGATCAGAGTGTCTTGATCAGGGA
AGTTGTGTAGAAAGTGCCTATATACCAGAAGCTGCAGAGCAAGAGCAAGCTTTCAAGAAT
GGTTTGAGTAAACCTTTTGCTGAAAATAAATTCTTTTTAGAGCATACATCTACTATTATA
GGTTCTAATTCCTTATTAAAAGACTGGTCTGACGTGAAGTTGGAAAGCTGCAAAGAGGTC
AGTGCAGATGCACAGTTACAAACCAAAGTGGAAGGTGGATCTCCTGATCTGGCTGATCCA
TTTGACATTAGAATTGTGGAAGGAACTCGAAAACAGTTAGATGATGACAGCAAACAGACT
GAATTAACTGTGGCGAATACTTGCAGTATAAAAGCTCCGATAGAAAAGAATGTGAATAGT
AGTGCCTTGGTTAACTCAGATAGTAGTGTACAGTTTCCCTTGTACAGGGACCCGGTTCCT
TGTGCTTCTTTTGTAAAGTCAAGGAACAATGTAAAGTTAGGTATTAGAGATGATGACGAA
AATTATTTTGGGTGCTATAGGCATAGCACTAAGATTAGGACCTTCAGGCCAACATCACGT
ATCACATACAGAAGAATAAGGAAGATGTTGACATCTAGACACTGGAAAGTAGCTCCTAAG
TTGAAGGACTGTGAGCGTTCTTACTCTAATGATGGAGTGAAGTCCTTTTATTGCAATAGG
AAAAACAAGCGTGGGAATGAAAGGTGTCGATTTGAAATTCCTTCCAAGAGAAGGAAATTG
TATGACCATGGCTTTGCTGTGGCGTATGACAAGGAGGCCAGTAGCGAAAGCATTTCAAAT
TCACATGAAAAGGGAATCAAGGGAGATACCGCAATCCCACCTAAAGGAGCTGGGGCTTCA
GCTTCAGTTATAAATCATCAGAAGGATCCTAATGTAAAATTTAGCATTAAGTCCTTCAAG
GTGCCAGAGCTTTATATTGAGGTTCCTGAAACGGAAACAATTGGTTCGCTGAAGAGAACA
GTAATGGAAGCAGTAACAGCTATCCTGGGAAGTGGATTACGGGTGGGGGTGGTTCTTCAG
GGAAAGAAGGTCAGAGATGATAATAGAACTCTACAGCAAGTTGGTATTTCACCGAATGAC
AATCTTGATACATTGGGTTTCACTTTGGAACCTAGTTTCAGCAAAGTTCCTCTGTCATTG
TCTCCTAAAGATGATACTCTTGCTTCAGCATCGTATATTACAGACCAAGAATTATCTAGG
CATCCATCTAGTCCTATCTTCGAATTGGGTCCTCCCAATGCTTTGTCAGATCCTCCAGAG
GCTAAGTTGGACAAGCATGATGAGAGTAACCATGAACTGGAGATGTCACCTGCAACTCCT
ATTGATCAATCAGCTGATGAAGCTTTTCCAGATTTTAAAGCCTTGGCCATAGTTCCTCCT
GTGAATACAGAGGCACTTGCTGTGGTTCCGGTGAATCATAAAAACAGATGTTCTGAACTT
TCACAGCGTAGGACAAGGAGGCCATTCTCAGTTGCTGAAGTAGAAGCGCTGGTCGAAGCT
GTAGAACAGCTTGGAACTGGAAGGTGGCGTGATGTTAAAATGCGTGCTTTTGATAATGCC
GATCACCGTACTTATGTTGACTTGAAGGATAAATGGAAGACATTAGTTCATACAGCAAGT
ATTGCCCCACAACAAAGAAGGGGAGAGCCGGTGCCCCAGGAACATCTTGACAGGGTCTTA
GCTGCCCATTCCTATTGGTCTCAGCATCAGGCCAAGCAACACGCCAAACAATATGCTGAA
CCTCTCAAAATTGTAGATGCTCAGGTGCAGAATGGCGTTGCTGCTTGA

Peptide Sequence

PEP ID

XP_016488592.1
PEP Infomation

PREDICTED: telomere repeat-binding protein 4-like [Nicotiana tabacum]
Sequence

MVSKKRLNCGFSGYQIPVIPKAPRSARKRRPCNKLDDDQICAFELLAAVAGKLLLESESS
ASSNAGAPAGKYELADCRDSIKHEQVEDDKAVRSECLDQGSCVESAYIPEAAEQEQAFKN
GLSKPFAENKFFLEHTSTIIGSNSLLKDWSDVKLESCKEVSADAQLQTKVEGGSPDLADP
FDIRIVEGTRKQLDDDSKQTELTVANTCSIKAPIEKNVNSSALVNSDSSVQFPLYRDPVP
CASFVKSRNNVKLGIRDDDENYFGCYRHSTKIRTFRPTSRITYRRIRKMLTSRHWKVAPK
LKDCERSYSNDGVKSFYCNRKNKRGNERCRFEIPSKRRKLYDHGFAVAYDKEASSESISN
SHEKGIKGDTAIPPKGAGASASVINHQKDPNVKFSIKSFKVPELYIEVPETETIGSLKRT
VMEAVTAILGSGLRVGVVLQGKKVRDDNRTLQQVGISPNDNLDTLGFTLEPSFSKVPLSL
SPKDDTLASASYITDQELSRHPSSPIFELGPPNALSDPPEAKLDKHDESNHELEMSPATP
IDQSADEAFPDFKALAIVPPVNTEALAVVPVNHKNRCSELSQRRTRRPFSVAEVEALVEA
VEQLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQEHLDRVL
AAHSYWSQHQAKQHAKQYAEPLKIVDAQVQNGVAA

Transcript Sequence

Gene sequence data has not been registered.